BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027A02SP1|AL428641
(891 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig932 1750 0.0
>3x_Contig932
Length = 3027
Score = 1750 bits (882), Expect = 0.0
Identities = 890/892 (99%), Gaps = 1/892 (0%)
Strand = Plus / Plus
Query: 1 ctttggaacataagcagatacatgttcgacgattttttcaacaccagtctgttcgtcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1988 ctttggaacataagcagatacatgttcgacgattttttcaacaccagtctgttcgtcata 2047
Query: 61 gtttctacctagggcatcaatgaattgaccttctgggtccatcaagtagaagaaaatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2048 gtttctacctagggcatcaatgaattgaccttctgggtccatcaagtagaagaaaatgga 2107
Query: 121 atgatcaactaaataatcctggccaggtttgacgtttggtggagtagagaaatagactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2108 atgatcaactaaataatcctggccaggtttgacgtttggtggagtagagaaatagactct 2167
Query: 181 gtattttttgcaagcattcttcacggcatcatagtcaccagttaaaccgataatgtcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2168 gtattttttgcaagcattcttcacggcatcatagtcaccagttaaaccgataatgtcagg 2227
Query: 241 gtggaactcgcttaggtattctttcaagacttctggtggatctctagccgggtcacaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2228 gtggaactcgcttaggtattctttcaagacttctggtggatctctagccgggtcacaagt 2287
Query: 301 aatgaaaacaggttgcaaattgatgtcacgcttctttaactcagttaaccatgctcctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2288 aatgaaaacaggttgcaaattgatgtcacgcttctttaactcagttaaccatgctcctaa 2347
Query: 361 cttatctaactcatctggacaaatatctggacaatgactgaaaccaaaatagatgataga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2348 cttatctaactcatctggacaaatatctggacaatgactgaaaccaaaatagatgataga 2407
Query: 421 gaacttgcctagcaagtctttctctgtaaatggattcccattaaaatcaatcaaactaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2408 gaacttgcctagcaagtctttctctgtaaatggattcccattaaaatcaatcaaactaaa 2467
Query: 481 gggacctccgaccaatggcctaccgtaacctctgttagcttccgcctccttctcggtctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2468 gggacctccgaccaatggcctaccgtaacctctgttagcttccgcctccttctcggtctc 2527
Query: 541 taatctttgcttctcatttttaaagaaatagtacaccccgcctccgataagaatgaacaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2528 taatctttgcttctcatttttaaagaaatagtacaccccgcctccgataagaatgaacaa 2587
Query: 601 agctgctgctttccaggtagtaaattcgatggtagaacctgtatcaactttttgggtatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2588 agctgctgctttccaggtagtaaattcgatggtagaacctgtatcaactttttgggtatg 2647
Query: 661 agtttcagcaccgccaatgggtatcctacttaatggcttcttcttaggttttggactacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2648 agtttcagcaccgccaatgggtatcctacttaatggcttcttcttaggttttggactacc 2707
Query: 721 tactgcaggggcagggtcatatttcttaatctcttgtaacttggttgcagatacggataa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2708 tactgcaggggcagggtcatatttcttaatctcttgtaacttggttgcagatacggataa 2767
Query: 781 cgatctgtaatgattcataaaatgggccaaggtagttttccttagcactggtctcattgc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2768 cgatctgtaatgattcataaaatgggccaaggtagttttccttagcactggtctcattgc 2827
Query: 841 ttctttag-arcaaaagtaatactagggacgcgaacaatgctgcgtaacatt 891
|||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2828 ttctttagaagcaaaagtaatactagggacgcgaacaatgctgcgtaacatt 2879
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6006
Number of Sequences: 1807
Number of extensions: 6006
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 891
length of database: 10,358,551
effective HSP length: 16
effective length of query: 875
effective length of database: 10,329,639
effective search space: 9038434125
effective search space used: 9038434125
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)